Sunday, September 25, 2011

The Secrets of Life (2) - Chromosomes and Health and Development

Normally every cell of the human body has 46 chromosomes, organized in 23 pairs (22 pairs of autosomes - same for female and male, and one pair of sex chromosomes - XX in female and XY in male). Hence, the chromosomes of an ordinary female is described as 46,XX and a male as 46,XY. During the formation of the egg and the sperm, the chromosome pairs separate so that each egg or sperm cell contains only one copy of the 23 pairs of chromosomes. When the egg and the sperm combine together at the time of conception, they form the first cell of the child which now has 46 chromosomes as the parents. However, during these processes of separation and combination, error may occur resulting in changes in the number, size and structure of the chromosomes. This will then change the amount or the arrangement of genetic information in the cells which may result in problems in health and development of the child:
A. Change in number of chromosomes
Sometimes, mistake may happen in the separation of the chromosome pairs during the formation of the egg or sperm, resulting in either an addition or deletion of chromosomes. When a sperm or egg with the usual 23 chromosomes combine with this egg or sperm with a changed number of chromosomes, it will result in an embryo with chromosomes of number more than or less than the usual number of 46.
Addition and deletion of chromosome have strict rules:
. deletion of any autosome (chromosome 1 - 22) is usually incompatible with life, resulting in miscarriage (流產) or stillborn (胎死腹中) in the first 3 months of pregnancy.
. addition of 2 or more autosomes is also usually incompatible with life in the first 3 months of pregnancy.
. addition of autosome other than chromosome 21 usually results in non-survival in infancy or early childhood (usually within the first year).
. addition or deletion of sex chromosomes (X or Y) is possible except that in the resultant chromosome, there cannot be Y-only chromosomes (i.e. Y chromosome must have an X chromosome in order for survival).
As such, the possible common changes in number of chromosomes and their related effect on the health and development of the child are listed as follows:

Chromosome condition

Description

Syndrome

Symptoms

47,XX+21

47,XY+21

47 chromosomes with extra chromosome 21 in female or male

Down’s syndrome (唐氏綜合症)

Mental retardation, smaller growth parameters including height, neck, head circumference etc., flat face. Usually infertility in male. High risk of miscarriage in female with 50% chance of conceiving babies with Down’s syndrome.

45,X

45 chromosomes with single X chromosome in female

Turner syndrome

Normal intellectual performance, slower growth and lower height, infertility

47,XXY

47 chromosomes with extra X chromosome in male

Klinefelter syndrome

Learning difficulty, tendency to grow at quicker rate, small testcles/penis, infertility

48,XXXY

49,XXXXY

rare extensions with additional X chromosomes) of 47,XXY (male)


More exaggerated features of 47,XXY syndrome

47,XXX

47 chromosomes with extra X chromosome in female

XXX syndrome

‘super-female’, usually no observable physical and medical anomalies apart from being taller than average, normal sexual development, risk of learning difficulty

48,XXXX

49,XXXXX

rare extensions with additional X chromosomes) of 47,XXX (female)


Decreased mental and physical ability, tall texture

47,XYY

47 chromosomes with extra Y chromosome in male

XYY syndrome

‘super-male’, usually no observable physical and medical anomalies apart from being taller than average, normal sexual development., risk of learning difficulty

B. Change in size of chromosomes
Sometimes, a portion of the chromosome is duplicated or deleted during the formation of the egg or sperm, resulting in extra or loss of genetic material in the chromosome. Some common examples and their related effect on the health and development of the child are listed as follows:

Chromosome condition

Description

Syndrome

Symptoms

46,XX,dup(17) (p12)

Duplication of p arm, band 1 and sub band 2 of chromosome 17 in female

Charcot-Marie-Tooth disease (腓骨萎縮症)

Loss of muscle tissues in feet and legs, high arch, claw toes.

46,XX,5p-

Deletion of part of p arm of chromosome 5 in female

Cri-du-chat syndrome (貓哭症)

Intellectual disability, delayed development, small head size, high-pitched cry sound like cat.

C. Change in structure of chromosomes
C.1 Inversion
Sometimes a segment of the chromosome breaks off, rotates 180 degrees and reconnects to the original chromosome during the formation of the egg or sperm. (e.g. 46,XY,inv(12) (p11.2q24.3) refers to a male with inversion in chromosome 12 from p arm band 1, sub-band 1, sub-sub-band 2 to q arm band 2, sub-band 4, sub-sub-band 3.)
Inversion usually does not cause any problems in health and development of the child as there is no gain or loss of genetic material. Only the order of the genetic information is changed. However, there may be complications and problems when the child further has children. We shall leave the discussion of these in a later blog.
C.2 Translocation
Sometimes, segments of 2 chromosomes break off and exchanged during the formation of the egg or sperm. (e.g. 46,XX, t(4,20) (q31,q12) refers to a female with translocation between chromosome 4, long (q) arm band 3, sub-band1 and chromosome 20, long (q) arm band 1, sub-band 2.)
Translocation is much more complicated than inversion as there is an exchange of chromosome segments (i.e. genetic material) between different chromosomes. It may or may not cause problems to the health and development of the child as depending on type of chromosomes involved (e.g. exchange of genetic material between autosome and sex chromosome) and the portion of chromosomes involved.

The above gives some simplistic views on how changes in chromosomes may affect the health and development of the child. It is recommended that affected individuals should seek professional advice from genetic counseling on details of medical issues, and implications on any possible inheritance issues when considering births of offspring ...................

Thursday, September 22, 2011

Lightning

Two men were attending a funeral service in a funeral parlour. After having a final view of the diseased in the coffin, one whispered to the other, "I heard poor George was struck by lightning. But why did he smile so brilliantly when he died?" The other replied, "He thought someone was taking a picture of him at that moment!"

Tuesday, September 13, 2011

The Secrets of Life (1) - Chromosomes, DNA and Genes

Our bodies are made up of millions of cells. Inside the nucleus of each cell, there are chromosomes (染色體). An ordinary human has 46 chromosomes in each cell made up of 23 pairs. The first 44 chromosomes (called autosomes - 常染色體) are numbered 1 to 22 according to size from the largest to smallest. The last 2 chromosomes (called sex chromosomes - 性染色體) could only be either X or Y chromosomes. A female has 2 X chromosomes whereas a male has one X and one Y chromosomes. Hence, a ordinary female's chromosomes are described as 46,XX and male as 46,XY. Usually, a mother passes 23 chromosomes (one from each pair) to her child through her egg and a father likewise passes 23 chromosomes through his sperm. When the egg and the sperm join together at the time of conception, they form the first cell of the child which now has 46 chromosomes as the parents. Hence, one half of the chromosomes are inherited from the mother and the other half from the father. The cell continues to multiply (duplicated from the first cell) as the child continues to grow, resulting in exactly 46 chromosomes in every cell of the body.

Chromosomes, when stretched out, can be as long as 12 centimetres. All of the 46 chromosomes together is about 2 metres long, yet coiled and fit into a single cell nucleus which is about 2 micrometres (0.00002 metres). Each chromosome has a short (p) arm and a long (q) arm separated by a narrow constriction called centromere. Under the microscope and with special stains, the chromosome can be seen as a series of alternate light and dark bands. The bands are labeled p1, p2, p3, q1, q2, q3, etc., counting from the centromere out toward the ends. At higher resolutions, sub-bands (also numbered from the centromere out towards the end) can be seen within the bands. At even higher resolutions, sub-sub-bands can also be seen. The first digit in the band label refers to the band, the second digit the sub-band and the digit after the period the sub-sub-band. For example, a band labelled 16 p13.1 refers to chromosome 16, p-arm, band 1, sub-band 3 and sub-sub-band 1 accordingly.

Chromosomes are made up of material called deoxyribonucleic acid (DNA-脫氧核糖核酸). Thus, each chromosome is a DNA molecule. The DNA molecule is made up of 2 very long chains of 4 chemical units: Adenine (A), Guanine (G), Thymine (T) and Cytosine (C). These 4 chemical units form the bases (as 'letters') of the genetic codes which contain all the information for human growth and development. The bases are arranged in pairs such that A is only paired with T, and G only with C. The bases are further grouped into triplets (e.g. TGA, CTG, ACT etc.) to form '3-lettered words'. Each triplet gives instruction for the cell to produce a particular type of amino acid. A sequence of triplets (e.g. TGACTGACTGTCATG ..... ) enables the cell to assemble the amino acids in the correct order for the cell to function. A complete sequence of triplets that contains particular instructions to perform a particular function is called a gene (基因). Hence, a gene is a basic unit that carries the genetic information for a particular function for human growth and development. Some genes may be responsible for producing certain type of cells like blood, hair or lung etc. Others may be responsible for producing materials with personal characteristics like colour of eye and skin, height or shape of the nose etc. Genes are labelled by their functions. (e.g. gene HBA1, haemoglobin alpha 1 located in chromosome 16, is responsible for producing a protein necessary for red blood cells.)


There are hundreds and thousands of genes in a chromosome, and it is estimated that there are about 25,000 - 35,000 genes in a single human cell. The number of chemical bases (letters A, T, G or C) in a gene varies as dependent on the function of the gene, but may range from 1, 000 to several hundred thousand. In total, there are about 3.1 billion bases (letters) in a single human cell. The arrangement of these 3.1 billion bases is very specific and unique for each individual, and hence the DNA sequence in the cell can be used like a fingerprint for individual identification. When there are changes in the chromosomes or genes (e.g. due errors during the conception of the egg and sperm or external factors like radiation etc.), the normal sequence of genetic codes in the genes (and thus the chromosomes) will be disturbed. Hence, the normal function to produce the necessary materials for the cell to develop will be affected. As result, problems in health and development may occur.

As of today, our knowledge in genes is still quite incomplete (including the exact number of genes and functions of all the genes). But with our increasing knowledge in the secrets of the genetic codes in the genes (and hence the DNA sequence), we can understand more and more about life including how we inherit our personal characteristics from the our parents, the process of aging and deceases and what problems we could expect on health and development. These can well be determined even before birth of the child by appropriate prenatal testings .....................

Thursday, September 1, 2011

射鵰英雄傳

最近翻看一部少時喜愛的武俠小說 - 金庸之(射鵰英雄傳).此書除有吸引人的武俠情節外, 更可看到金庸之文學修養, 及其深湛文筆之功力. 其中一段描寫郭靖, 黃蓉求見當代五大高手(東邪, 西毒, 南帝, 北丐, 中神通)之南帝段皇爺. 南帝當時己歸於佛法, 化名一燈大師, 隱居深山, 不聞世事. 南帝昔日之四大弟子: 漁(漁人), 樵(樵子), 耕(農夫), 讀(書生),為保一燈大師免受滋擾, 各以每人所長, 力阻二人求見. 郭, 黃幾經辛苦, 終於去到最後書生的一關. 書生以其文才, 開出一度難度極高之絕句, 要求二人對出工整之下聯. 能者可繼續上山, 不能者便得知難而退. 其上聯如下:

琴瑟琵琶 八大王一般頭面

黃蓉冰雪聰明, 不消一刻, 己對出非常工整之下聯, 並乘勢嘲諷漁樵耕讀一下. 然後順利過關上山:

魑魅魍魎 四小鬼各自肚腸

其後, 不少文人雅士, 爭相嘗試對岀下聯. 現搜集了一些出色的摘錄如下:

鼴鼮鼫鼬 四賊鼠各踩尾巴 : 鋼鐵銅鋁 四千金不同心腸
烤燴炒炸 四把火旁敲側擊 : 栗桑欒檗 四巨木不同枝葉
駙駿駒馳 四小馬各奔前程 : 猙獰獐狡 四小犬各有面容
閨閣闈閫 四內門各有風光 : 簫筑箏篁 四翠竹各懷清音
懼怕懾憚 四顆心同樣畏縮 : 盯眺盼瞻 四雙目各有看頭
齮齦齟齬 四利齒不一唇舌 : 囚囡囝因 四巨囗各吞一人
珍瑾玲珊 四美玉各領風騷 : 妻妾婆嬰 四嬌女十分麻煩
雷電雪雹 四方雨同等天氣 : 蛇蟺螻蛄 四小虫一般蠢動
挑撥按撚 四纖手別有風姿 : 嫵媚婉妙 四仙女別有風情
倜儻俊俏 四才人別款燦華 : 孫孺孩孤 四男子同等裝扮
飴餃飩餅 四麵食不同餡兒 : 舫舲舴艇 四小舟不同風帆
鵲鴿鴉鵑 四小鳥各自飛翔 : 峭嶇崆峒 四壯山各有形態
貂貉貆獾 四獸豸不盡相同 : 癰疔疽癤 四惡瘡相同爛皮
囚困囹圄 四監牢各關重犯 : 癡癖癲瘋 四狂者各有心疾
雞鴨鵝鴿 四肥鳥各自享用 : 峨嵋崆峒 兩名山譽滿天下

一部武俠小說, 除開故事情節不談, 能夠引起如此的文學迴響, 實不愧為一部不可多得的名著.

至此, 在下亦不禁一時技癢, 附庸風雅一番:

Barry, Benny, Billy, Bobby 四小B同一性別
Ancient History, Business Accounting, Modern Algebra, Visual Arts
四科A一剎光華
John, Vickie, Veronica, Johnson four smart MAN 各有千秋